Insertion junction: CLIP2.024222_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024222
Chromosome:chromosome 1
Location:7882193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g055436 (1 of 1) PF05458 - Cd27 binding protein (Siva) (Siva) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGATGGCCGCGGCTCGCGCTCGCAGTGGCCAAACGAGCCAGTCCCCACAA
Internal bar code:ATTTCACCCCGTTCGCCGGAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1847
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:ACAGTCAGCAATGACCGAGG
Suggested primer 2:ACTTGCAGCGCTTGTACTCT