Insertion junction: CLIP2.024230_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024230
Chromosome:chromosome 10
Location:4055074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g447767 AOF2 Amine oxidoreductase, flavin-containing; (1 of 1) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCTAATTGTTGTGCAGCAAGTCATGTCAGCTTTGTTGACGCGTATTAT
Internal bar code:ACGGTCAGCCTGGTTTTTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3059
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CATCAGCGGACTGTCACTGT
Suggested primer 2:GCGTATTAGGACCGGACCAG