Insertion junction: CLIP2.024238_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024238
Chromosome:chromosome 1
Location:2851928
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00002540

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAACTCAGTCAAAACTCGGAGGAAACTCGGAGGAAACTCGGCTGAAACT
Internal bar code:CGATAAAAGACGTTGAATTCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2859
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGAACGTGACCATAGCC
Suggested primer 2:CATGGGTCGGGTAGCTGTAC