Insertion junction: CLIP2.024254_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024254
Chromosome:chromosome 1
Location:4849997
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g033700 (1 of 1) PF01933 - Uncharacterised protein family UPF0052 (UPF0052) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGGAATTGATTAGGCCCGCCCCCCCCCTGGGCTGGGAATGGTGGAAAC
Internal bar code:GTTTTAGCTTGCAAATGGTATA

Confirmation - LEAP-Seq

LEAP-Seq distance:194
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGTGCTGTGTGTGTTAC
Suggested primer 2:GATGGAGGTGTAGAGCGAGC