Insertion junction: CLIP2.024266_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024266
Chromosome:chromosome 2
Location:3971386
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102600 (1 of 1) PTHR23012:SF92 - RING/U-BOX DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTATACATAAATGCTACGCAGGGATGTGCTTTTGGAGACCGTAGTACCGG
Internal bar code:GGGGATATGGGTATTAAGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1239
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:ATTGGAAGCGTTTTGGCACC
Suggested primer 2:GAGCTGGATGGAGACGGATG