Insertion junction: CLIP2.024273_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024273
Chromosome:chromosome 11
Location:3065705
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g474850 PUS17 (1 of 2) 5.4.99.29 - 23S rRNA pseudouridine(746) synthase / 23S RNA Psi(746) synthase; RNA pseudouridine synthase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAACAAGAAGCTTCTGAACCTCTTTGAAAGCCCTTCGAAGCACCAGCCC
Internal bar code:TCGTGTGGCAGGCCCAGGGCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1324
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGTTGTGACTCCGGTAC
Suggested primer 2:AGTACCTGCGGTGTTCACTG