Insertion junction: CLIP2.024278_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024278
Chromosome:chromosome 2
Location:1567581
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g084750 (1 of 1) PTHR24012:SF497 - TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACTGCCACCTCCAGCAGCCGCAGCGGCCCGGCCGCCACCGCCGCCCTCA
Internal bar code:CGATTGTAGTTAGTGGTTTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:694
LEAP-Seq percent confirming:41.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGCTGTAGCACATGGAG
Suggested primer 2:AGGCAGATGTAACAACCCCG