Insertion junction: CLIP2.024283_4

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024283
Chromosome:chromosome 11
Location:3516064
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477700 (1 of 752) IPR027417 - P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTCACGCTCCATGCCGGCAAGCTCTGTGGCGTGGAACCGCAACAGAT
Internal bar code:TCCGTGGAGTATCATTGGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:1822
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTCCATTCCGCTTAGCTA
Suggested primer 2:CACTGGCATGCTCCTCCTC