Insertion junction: CLIP2.024285_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024285
Chromosome:chromosome 9
Location:512948
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre18.g748797 (1 of 1) PTHR32026:SF10 - PROTEIN Y39F10A.3-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCGGGCTGGAAAACGCACCGTGAAAGGTTCTTATGGGCTTCGCGAAG
Internal bar code:TATCCAGCCGGGAATATCAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:2831
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:GCCACTCTACATACTCCGGC
Suggested primer 2:CTGTCGTGCAAACACCCTTG