Insertion junction: CLIP2.024289_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024289
Chromosome:chromosome 1
Location:5965977
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g800107 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGAGAGCAGGACGTCTGGCTCCAATAGGGTGGCGGCGACGGGGGCGGGG
Internal bar code:TCGTGACTCTAATGGTCTCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2992
LEAP-Seq percent confirming:44.4444
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTTCGCTGCTGCAACCAT
Suggested primer 2:CCACATACGACGCTCCAGTT