Insertion junction: CLIP2.024294_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024294
Chromosome:chromosome 17
Location:2430654
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714800 ISG6,ISG-C3 (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTTGCGGCAGGCTCTGTCTGGCGGGTGCTTTCCCTGCCTCCTCTGCTCA
Internal bar code:CAATGGTGTTGATTTAGACAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3466
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:78
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:78

Suggested primers for confirmation by PCR

Suggested primer 1:TCTCTCCGAACGGACCTGAT
Suggested primer 2:CCTTGCTAGGTGCTTCTGCT