Insertion junction: CLIP2.024294_4

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024294
Chromosome:chromosome 17
Location:2430655
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g714800 ISG6,ISG-C3 (1 of 5) PTHR16631:SF9 - GLUCAN 1,3-BETA-GLUCOSIDASE; Hydroxyproline-rich cell wall protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGGACCAAAGCCCTGACCCTGTTTCTCACCCTGCCTGTTTCCCATCC
Internal bar code:GATTATTACAAGAGTTTTACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:795
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CCTTGCTAGGTGCTTCTGCT
Suggested primer 2:TCTCTCCGAACGGACCTGAT