Insertion junction: CLIP2.024297_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024297
Chromosome:chromosome 9
Location:5491824
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801072 (1 of 1) IPR026849//IPR026854 - Autophagy-related protein 2 // Vacuolar protein sorting-associated protein 13A, N-terminal domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCACAGTGACCTCTTTGCCGCTGCCGTTTTTCGCTTCATCACGCCCTC
Internal bar code:AAAATCGTGTAATGTCTAGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:349
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTCTTGTGCAAAACCGCC
Suggested primer 2:CCAGCCCCAAGACTGAGAAG