Insertion junction: CLIP2.024303_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024303
Chromosome:chromosome 10
Location:2416528
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435200 (1 of 4) IPR000533 - Tropomyosin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCTGACTAGCAGTGGCCGGCAAGGTGGGCATCGCGGCCCTCCGTCTCTG
Internal bar code:CTCATGTAGGTTTTAGCTTAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2377
LEAP-Seq percent confirming:92.0
LEAP-Seq n confirming:46
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGATGTCCTTCGCAATGCAG
Suggested primer 2:GTTGCCGTCCCAATCTACCA