Insertion junction: CLIP2.024313_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024313
Chromosome:chromosome 16
Location:7033476
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g802001 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACAGGTAGCCGGGTAGCCAGCAAGGTTCACACTGTACTCCTGCCCCCTC
Internal bar code:ACGGTTTCTATTATAAATAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:2477
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCACAGTTGTCAACAGCC
Suggested primer 2:CGTACAATCCGAGCTCCCTC