Insertion junction: CLIP2.024313_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024313
Chromosome:chromosome 16
Location:7033483
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g802001 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCTGTACACGAGCCCCATCCTGTCCAACCGACCACCTGTTTACTCATTC
Internal bar code:ACGGTTTCTATTATAAATAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1821
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTACAATCCGAGCTCCCTC
Suggested primer 2:CAGCACAGTTGTCAACAGCC