Insertion junction: CLIP2.024318_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024318
Chromosome:chromosome 4
Location:1069203
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g216350 AKR7,CPLD3 Conserved in the Plant Lineage and Diatoms; (1 of 1) K05275 - pyridoxine 4-dehydrogenase (E1.1.1.65) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTGCAGCGCGAGCTCCTGTGGATGTTGCAGGAGGCGGGTGCAGGGGGT
Internal bar code:AAGATGTCTGCGAAATACAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1597
LEAP-Seq percent confirming:83.871
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGTACAGTCTGCTGCAGG
Suggested primer 2:AGCTGCAACCCCATTCCTAC