Insertion junction: CLIP2.024320_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024320
Chromosome:chromosome 6
Location:3149779
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275850 HTA6,HTA3 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGAACCCCTAACTCGATACAATGGCTGGTCGCGGCAAGGGCAAGACCT
Internal bar code:AATTCGTAAAAGGGAACTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4576
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:126
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:132

Suggested primers for confirmation by PCR

Suggested primer 1:TCACCAAACCCGTTCCCAAA
Suggested primer 2:GGTCCAGCCTGAGAGCTTTT