Insertion junction: CLIP2.024320_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024320
Chromosome:chromosome 6
Location:3149782
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g275850 HTA6,HTA3 Histone H2A; (1 of 30) K11251 - histone H2A (H2A) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGCAGAACGAGATAAGAGGGCTGTGAGTAAGTGTTGAAAGCGCTGTAAT
Internal bar code:AATTCGTAAAAGGGAACTAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1858
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:37

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCCAGCCTGAGAGCTTTT
Suggested primer 2:TCACCAAACCCGTTCCCAAA