Insertion junction: CLIP2.024327_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024327
Chromosome:chromosome 4
Location:3174771
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g226150 AOC1 (1 of 4) PTHR11785:SF367 - AMINO-ACID PERMEASE BAT1; Amino acid carrier intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGCAGGGGCAGGGGCAGGGAGCAGGACGAGGTCTACACCACCGACACC
Internal bar code:AGCGTCGCGTAATCAAATTATC

Confirmation - LEAP-Seq

LEAP-Seq distance:1060
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGGAGGAGGATGAGGTGAGG
Suggested primer 2:AGTGGTTGTGTGTCGGTTGT