Insertion junction: CLIP2.024331_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024331
Chromosome:chromosome 12
Location:1513509
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487800 CDS
lncRNA_TCONS_00076818 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACAGGCAAGGGGTTCTATGGACCAGCTGCATTCACAGACGGCCACTGA
Internal bar code:AGGCCAAAGGGGCCCTGCACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2154
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACATGGTGTGCAGCGAA
Suggested primer 2:GTGTTGTGACTCGCTCCTGA