Insertion junction: CLIP2.024334_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024334
Chromosome:chromosome 3
Location:348037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144607 (1 of 79) IPR011992 - EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCATCCTGCCGCCTTCGTCCTTCACCGTCTCACGCACCCGGGCTTTCC
Internal bar code:GTGCTTCGTGTCGCCGCGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:219
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTGATTACCGTGGGCGA
Suggested primer 2:ACCTTTCACCACAGCACACA