Insertion junction: CLIP2.024337_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024337
Chromosome:chromosome 7
Location:1836238
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g325734 FAP340 (1 of 1) PTHR11349:SF44 - NUCLEOSIDE DIPHOSPHATE KINASE II, CHLOROPLASTIC; Flagellar Associated Protein 340 CDS
lncRNA_TCONS_00234220 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATGCCCTCGGGGAACCAGATGGCTGCAACATAGGGGGTGGGGTGCAGGG
Internal bar code:AATCTCTGGGCCTTTAAAGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1501
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GATTGTCCGCTCCTCTCCTG
Suggested primer 2:CCTTCATTCAAGTCCCCGCT