Insertion junction: CLIP2.024346_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024346
Chromosome:chromosome 9
Location:4892230
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g801061 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTATACGATGACGACCCCTCATCCTCAGCATTGAGCTGAGCTGTCGT
Internal bar code:AGCGGCATTAGCGCAGTGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4430
LEAP-Seq percent confirming:41.9753
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAATCGTGCGGCTGCTAG
Suggested primer 2:GCATGCTATTGTGCCTTCCG