Insertion junction: CLIP2.024349_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024349
Chromosome:chromosome 14
Location:2391310
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g623300 NCP1,NCPR1,NCR1 NADPH--cytochrome P450 reductase-related protein; (1 of 1) 4.1.3.44 - tRNA 4-demethylwyosine synthase (AdoMet-dependent) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCTCGGGAGGGGTTGTTGGAGTTAAAGAGTGAAATGGATTGGGTTACA
Internal bar code:GAGACCGTGGACATATAGTCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:767
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:TCTTCCACTTCCACGTCTGC
Suggested primer 2:CAAAGTGTCCTTGACGCGTG