Insertion junction: CLIP2.024359_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024359
Chromosome:chromosome 2
Location:1606515
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g085050 COP1,PCOP1 Plant-type constitutive photomorphogenesis protein 1; (1 of 2) K10143 - E3 ubiquitin-protein ligase RFWD2 (RFWD2, COP1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCGGTATGGTCGAGAGCACGAGGCAGGAAGCACACGACCACTGCATCA
Internal bar code:TTCGGCTTACATAGATGATGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:396
LEAP-Seq percent confirming:27.2727
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTCACACCATATGTTCGC
Suggested primer 2:CCCCGCATATTTCAGCATGC