Insertion junction: CLIP2.024362_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024362
Chromosome:chromosome 2
Location:7878935
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g145800 MDN3,MDH3 NAD-dependent malate dehydrogenase 3; (1 of 1) K00025 - malate dehydrogenase (MDH1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTTCTTGGCATCGTGGCGGTGGTGCATGTGGTATGTGTGCTCGGGCAGC
Internal bar code:TTAGAAGAAGTATCGGCCTGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1652
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATCTCAAGCATGAAGG
Suggested primer 2:TGAGTTTGCTGGCGCTTCTA