Insertion junction: CLIP2.024363_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024363
Chromosome:chromosome 2
Location:1961583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g087950 TSM1 Methionyl-tRNA synthetase; (1 of 1) PTHR11946:SF86 - METHIONINE--TRNA LIGASE, CYTOPLASMIC intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCGCAACGTGTGTCGCAGGCGTGCGGGGGCTGCGACCAGCCCCGGCA
Internal bar code:CGTTGTTAGGTGCGTTCGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1589
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCATGCTGCGGAATGAAG
Suggested primer 2:ACCAAAACCAAGCGTCCTCA