Insertion junction: CLIP2.024364_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024364
Chromosome:chromosome 2
Location:828658
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g800173 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGTACTGCACGAAGAAGCAAGTCACAGGCATGAAATATGGAGATTCCG
Internal bar code:GATGAATTGCTCGATGGGGCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:885
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGTTGTTGCCCTTGAGGTTG
Suggested primer 2:ACGCGCCTTTCAAAGCATTT