Insertion junction: CLIP2.024367_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024367
Chromosome:chromosome 1
Location:3309334
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g021300 (1 of 2) IPR016140 - Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGCGTCAACCGCAACCTCGTGTCCTCCGTGTGAGTCCGTGTCCTTGTG
Internal bar code:TCTCGACTATTCACCTCTGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2429
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGGCGGCCTAACAACTAA
Suggested primer 2:GCAGCAAGACAACCTGAACG