Insertion junction: CLIP2.024376_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024376
Chromosome:chromosome 7
Location:2090734
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326100 5'UTR
Cre07.g326150 (1 of 34) IPR000571 - Zinc finger, CCCH-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCACATAAGGGCCTTGGCGGCGCCAGCTTTCCTGTCACTGAAGCTCCC
Internal bar code:GTTGTGTGCGGAAGAGGTGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5077
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GACGCCAGTGTAGGTGAACA
Suggested primer 2:TTCCTGACCTGTGGTTACGC