Insertion junction: CLIP2.024376_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024376
Chromosome:chromosome 7
Location:2090735
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g326100 5'UTR
Cre07.g326150 (1 of 34) IPR000571 - Zinc finger, CCCH-type intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATACACCTCAGCCTATTGACACACGTGATGGCGAGGGGCTGGTCGCGCGC
Internal bar code:TGTAAACATTACGCTAGAAACA

Confirmation - LEAP-Seq

LEAP-Seq distance:1652
LEAP-Seq percent confirming:61.9048
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTGACCTGTGGTTACGC
Suggested primer 2:GACGCCAGTGTAGGTGAACA