Insertion junction: CLIP2.024377_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024377
Chromosome:chromosome 6
Location:5428374
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g285700 (1 of 1) PTHR13466:SF0 - PROTEIN F55C12.5, ISOFORM B intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCCCAGGCTCCAGCTAGCCACGCCTGCCCCTGCCACGCCCCACGCT
Internal bar code:CCGTATCTGTAGATAAGTTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:4716
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTTCTCGGGTGCGTGATT
Suggested primer 2:CCACCTTCCTCACTGCTCAG