Insertion junction: CLIP2.024378_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024378
Chromosome:chromosome 2
Location:7193875
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00137361

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATTCTCGTGTCACGCTGTCGACTTCGCGGCCATGGATGACACCCATCGT
Internal bar code:CTTAATGGGATTCGCATTCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:4223
LEAP-Seq percent confirming:98.0769
LEAP-Seq n confirming:102
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:104

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGTGAGGAGACGTGCAAC
Suggested primer 2:CCACTTTGTCACAAGTGCCG