Insertion junction: CLIP2.024378_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024378
Chromosome:chromosome 2
Location:7193878
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00137361

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCGCCGGCATCCTCTTGTTCCTGCGACGGTGCGGCCCAACCGCCGCAG
Internal bar code:TTGGTTAGCGAAATTTGAAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:4032
LEAP-Seq percent confirming:96.7742
LEAP-Seq n confirming:90
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:93

Suggested primers for confirmation by PCR

Suggested primer 1:CCACTTTGTCACAAGTGCCG
Suggested primer 2:TCAGTGAGGAGACGTGCAAC