Insertion junction: CLIP2.024381_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024381
Chromosome:chromosome 4
Location:3589591
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228550 (1 of 2) PTHR31140//PTHR31140:SF1 - FAMILY NOT NAMED // B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGCTGGGGTAGGCGCGAGAGCACGCGTTCATGCATTCATGCGTTCAGC
Internal bar code:GGCCCCCCTCTACTTGAACCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:518
LEAP-Seq percent confirming:75.7576
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCGCACTCCGATCTGTAT
Suggested primer 2:AACCCTACGGTATCCTGCCT