Insertion junction: CLIP2.024392_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024392
Chromosome:chromosome 10
Location:5102295
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g455190 (1 of 1) PF04989 - Cephalosporin hydroxylase (CmcI) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTACGTGTGGGGGGGGGGAGCGTGCTGGAGAGCTGTGTCTGGCTGTCGT
Internal bar code:GCAGGGCCCGGTGTTATTGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:355
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCTCATTCAAGAACGGCT
Suggested primer 2:AGGGTGGTTACATGCCGAAG