Insertion junction: CLIP2.024401_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024401
Chromosome:chromosome 13
Location:2362724
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g579100 APC1 (1 of 1) K03348 - anaphase-promoting complex subunit 1 (APC1); Anaphase promoting complex subunit 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGGGTGGCCGGATATCCCAATGGCTCCGCGGGCATGCTGCTGGGGTCA
Internal bar code:CCACAGGGAACCGGATAAAATC

Confirmation - LEAP-Seq

LEAP-Seq distance:212
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AAAGATACCCCCGCATTGCA
Suggested primer 2:CTGCAGTTTCACCTTTGCCC