Insertion junction: CLIP2.024406_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024406
Chromosome:chromosome 12
Location:1554545
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g487600 CPS2 Putative cleavage and polyadenylation specificity factor 100 kDa subunit; (1 of 1) K14402 - cleavage and polyadenylation specificity factor subunit 2 (CPSF2, CFT2) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTACTTGCAAGGGATGGGTGGGTCGGCGCCGGTGCTTAAGGGCATGAC
Internal bar code:ACAGGACCAGAATATTGGCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1004
LEAP-Seq percent confirming:80.7692
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:26

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATAGATGACTTCCCGA
Suggested primer 2:TGCTTTCCACTTTGCAACCG