Insertion junction: CLIP2.024415_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024415
Chromosome:chromosome 3
Location:2583040
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g160150 (1 of 35) IPR016135 - Ubiquitin-conjugating enzyme/RWD-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGTGCGGGCGCACGTACCAGCATTGAAAACTAAGAAGTTGTCATGGCAG
Internal bar code:TGAAGATAGGCTTACCGCTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1742
LEAP-Seq percent confirming:92.3077
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:CAAACGGTGCTGCGCTATAC
Suggested primer 2:TTTTGTAGTTGCGCCAGTGC