Insertion junction: CLIP2.024416_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024416
Chromosome:chromosome 4
Location:2662080
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g223150 NCL1,CLR18,OPR20 (1 of 1) IPR008920 - Transcription regulator FadR/GntR, C-terminal; Nuclear Control of chloroplast Like 1 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGCGCTGTATGCCCTGGGCAAGCTGCGGGAGCAGCAGCAGCAGCGGGG
Internal bar code:AACGAAGCCTGAAAGAGTGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2906
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGTTTGCACATTCCTGT
Suggested primer 2:CAAGCAGTCATTGATCGGCG