Insertion junction: CLIP2.024423_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024423
Chromosome:chromosome 7
Location:2445502
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g329100 outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATGGCACAGCGCGAGCCCGCGCTCGTCCTTCGGACATCCACAATGCA
Internal bar code:AAATGCGTCATTAGTTAATCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2204
LEAP-Seq percent confirming:79.4118
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:TTTGGTTTGCATGCCGTCAG
Suggested primer 2:TTAACACCGGGGATGAAGGC