Insertion junction: CLIP2.024438_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024438
Chromosome:chromosome 1
Location:5832400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g041800 (1 of 52) 2.7.11.22 - Cyclin-dependent kinase / Cdk-activating protein kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGTGATTGTGGTGCCATCCCCGCGCTCGAGCACATCGCCAACGGCCAC
Internal bar code:GTACCGGATCAGGCGGAGCGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:197
LEAP-Seq percent confirming:7.40741
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGTAAGGTGGTGTTCGCTGA
Suggested primer 2:CCTGCAAGAACCAATGCCAC