Insertion junction: CLIP2.024440_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024440
Chromosome:chromosome 16
Location:507072
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692902 AHI1 Abelson-helper integration site 1; (1 of 3) PTHR22847:SF361 - JOUBERIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCCATCCCCACCCCACCTCTTTTCGCCGCTCCCTGCGCCTCGCGCTGC
Internal bar code:AATAGTTGTTTAATTAGTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:12
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:AGTCAACACAGGAGCAGAGC
Suggested primer 2:CGATTGCGGCCTAAACGAAG