Insertion junction: CLIP2.024473_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024473
Chromosome:chromosome 6
Location:7013752
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g297150 RWP9 (1 of 16) PF02042 - RWP-RK domain (RWP-RK); RWP-RK transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCATGGTCATTGTCGTCGTCGTCAGCGGCGTCCTCAGCGTCCGGGCCC
Internal bar code:CAACCTTGTTTCTAGTCAAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:223
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CTAGGGTTCGCATTCGACGA
Suggested primer 2:GCTTGGTTGCAAGGTTGAGG