Insertion junction: CLIP2.024476_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024476
Chromosome:chromosome 13
Location:241552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g563600 UBQ7 Ubiquitin-fusion protein; (1 of 5) IPR000626//IPR019956//IPR029071 - Ubiquitin domain // Ubiquitin // Ubiquitin-related domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCCATCCCGCGAGCACCAGCAATCACCTTCCCCTGCGCCCGCCCGGCC
Internal bar code:GTTGAAAACATTAGACAGAAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:4218
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:87
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGGTTCACGTCCTTTGC
Suggested primer 2:TCGGGAGGTTTCTGTTGAGC