Insertion junction: CLIP2.024479_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024479
Chromosome:chromosome 13
Location:3326343
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g586200 (1 of 7) IPR013026//IPR013105//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat 2 // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTACACACAGGTCAGCTGTCAAGGCGGCGGCCGGCGGCGACGTCCTGCC
Internal bar code:GGTACTACAATGAATGACCTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:770
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CACATGCTCCATTGCCATCG
Suggested primer 2:CGTTCAACGTGCTGCTATCG