Insertion junction: CLIP2.024488_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024488
Chromosome:chromosome 17
Location:6838588
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g747247 FAP2 TPR-domain Flagellar Associated Protein 2; (1 of 1) IPR002151//IPR003593//IPR013026//IPR019734//IPR027417 - Kinesin light chain // AAA+ ATPase domain // Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTGTTTGAACCTTCCAAACCCATCCTCCCCTGTCTCACAACTCGTACC
Internal bar code:TAGGTATATGGGAGGGCATAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:797
LEAP-Seq percent confirming:75.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CGTCAGAGCCACTCCTAACC
Suggested primer 2:GCCTTCCTGCAGGGTGTTAT