Insertion junction: CLIP2.024489_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024489
Chromosome:chromosome 3
Location:2830073
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g162050 HDA4 RPD3/HDA1 type histone deacetylase; (1 of 1) PTHR10625//PTHR10625:SF120 - HISTONE DEACETYLASE // HISTONE DEACETYLASE 15 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCGCTGCGCCCTGCACGCCTGCCGCGCCGCCACGGATGCCGAGCT
Internal bar code:ATCACTACGGCTCCAAGTGCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:4160
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:42

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCTCTCCTTGGTCTTGCC
Suggested primer 2:GCATCAGTAACGGCAATGGC