Insertion junction: CLIP2.024502_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024502
Chromosome:chromosome 3
Location:1559999
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g152200 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCGCCCACATGCGTAAATATGCGGGTCAGCGACTGCCGTGCAATTGAG
Internal bar code:GACTGCTGTTGGCCTAGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2242
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:AACAGTACATGCGTCCGGTT
Suggested primer 2:CAGCTGTCCGACCTCGTATC